29 October 2023 to 3 November 2023
DLNP, JINR
Europe/Moscow timezone

CULTIVATION OF HALOPHILIC ARCHAEA HALOBACTERIUM SALINARUM.

30 Oct 2023, 19:00
3h
The International Conference Hall, Stroiteley str. 2

The International Conference Hall, Stroiteley str. 2

Speaker

Daria Kuklina (Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny, 141700, Russian Federation, Laboratory of Structural Dynamics, Stability and Folding of Proteins, Institute of Cytology, Russian Academy of Sciences, St. Petersburg, 194064, Russian Federation)

Description

Halobacterium salinarum is a rod-shaped motile extremely halophilic archaea, capable of living in saturated salt solutions. It is believed to be extremophile as its natural habitat is characterized by extreme UV radiation and inconsistent nutritional conditions. Although Halobacterium salinarum is an aerobic chemoorganotroph, it can also survive in anaerobic conditions by utilizing light energy. It becomes feasible due to the large amount of bacteriorhodopsin (BR), which transduces light energy to generate proton gradient for ATP synthesis, in their membranes (Eichler, 2023). Bacteriorhodopsin is known to form 2-dimensional clusters in the native membrane; such membrane fraction carrying BR is called purple membranes (PMs). PMs isolated from Halobacterium salinarum features BR:lipid weight ratio up to 4:1 (Oesterhelt & Stoeckenius, 1974). The other native membrane fraction is red membranes, rich with caronenoid bacterioruberin.
Cultivation of Halobacterium salinarum has a significant value both for scientific and practical applications: biomass with anti-oxidative and radio protective properties can be used as dietary additives, cosmetic bioactive compounds and others; BR is a promising material for information storage systems, optical switches, ultra-speed light detectors, etc. (Kalenov et al., 2016). Moreover, PMs are used as a model object for membrane proteins crystallization optimization, e. g. for investigation of morphological transformations in crystallization matrix and mechanisms of membrane fusion (Bogorodskiy et al., 2015; Murugova et al., 2022).
As long as PMs are of interest to our further research, in this work we investigated the influence of growth conditions on the resulting purple/red membranes ratio in two different Hbt. salinarum strains. First of the used strains was SGS (Kalenov et al., 2016), the second – S9. The used protocol of cultivation in flasks with minor changes (Kalenov et al., 2016) implies the addition of adsorbents, such as activated charcoal, to the growth medium. Hbt. salinarum were grown at +42℃ in the presence of light. In this study we compared cultivation of both strains with and without charcoal in the medium in terms of the biomass colour. While other conditions were the same, in the presence of charcoal SGS strain had purple colour, S9 strain – reddish; in the absence of charcoal both strains were reddish.
Activated charcoal has a positive effect on BR synthesis as it adsorbs metabolites, inhibiting cell growth, and products of oxidative stress, inducing carotenoid synthesis. As a result, it helps to obtain a larger amount of cells that express less carotenoids, therefore, purple/red membranes ratio increases. Our investigation shows, that in case of S9 strain such approach does not allow to achieve prevalence of PM fraction, though in case of SGS strain it is effective.
This research in supported by the Russian Science Foundation (grant No. 23-74-01076).

Bogorodskiy, A., Frolov, F., Mishin, A., Round, E., Polovinkin, V., Cherezov, V., Gordeliy, V., Büldt, G., Gensch, T., & Borshchevskiy, V. (2015). Nucleation and Growth of Membrane Protein Crystals in Meso - A Fluorescence Microscopy Study. Crystal Growth and Design, 15(12), 5656–5660. https://doi.org/10.1021/ACS.CGD.5B01061/SUPPL_FILE/CG5B01061_SI_003.AVI
Eichler, J. (2023). Halobacterium salinarum: Life with more than a grain of salt. Microbiology, 169(4). https://doi.org/10.1099/MIC.0.001327
Kalenov, S. V., Baurina, M. M., Skladnev, D. A., & Kuznetsov, A. Y. (2016). High-effective cultivation of Halobacterium salinarum providing with bacteriorhodopsin production under controlled stress. Journal of Biotechnology, 233, 211–218. https://doi.org/10.1016/J.JBIOTEC.2016.07.014
Murugova, T. N., Ivankov, O. I., Ryzhykau, Y. L., Soloviov, D. V., Kovalev, K. V., Skachkova, D. V., Round, A., Baeken, C., Ishchenko, A. V., Volkov, O. A., Rogachev, A. V., Vlasov, A. V., Kuklin, A. I., & Gordeliy, V. I. (2022). Mechanisms of membrane protein crystallization in ‘bicelles.’ Scientific Reports 2022 12:1, 12(1), 1–17. https://doi.org/10.1038/s41598-022-13945-0
Oesterhelt, D., & Stoeckenius, W. (1974). Isolation of the cell membrane of Halobacterium halobium and its fractionation into red and purple membrane. Methods in Enzymology, 31(C), 667–678. https://doi.org/10.1016/0076-6879(74)31072-5

Primary author

Daria Kuklina (Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny, 141700, Russian Federation, Laboratory of Structural Dynamics, Stability and Folding of Proteins, Institute of Cytology, Russian Academy of Sciences, St. Petersburg, 194064, Russian Federation)

Co-authors

Ivan Okhrimenko (Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny, 141700, Russian Federation) Ms Elizaveta Dronova (Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny, 141700, Russian Federation) Mr Anatolii Mikhailov (Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny, 141700, Russian Federation) Dr Yury Ryzhykau (Research Center for Molecular Mechanisms of Aging and Age-Related Diseases, Moscow Institute of Physics and Technology, Dolgoprudny, 141700, Russian Federation, Frank Laboratory of Neutron Physics, Joint Institute for Nuclear Research, Dubna, 141980, Russian Federation)

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