29 October 2023 to 3 November 2023
DLNP, JINR
Europe/Moscow timezone

Studing of factors affecting the stoichiometry of the ATP synthase c ring.

31 Oct 2023, 17:20
15m
Conference Hall (2nd floor), BLTP

Conference Hall (2nd floor), BLTP

Oral Life Science Life Science

Speaker

Andronika Minaeva (Student)

Description

ATP synthase is an essential protein complex integral to the bioenergetics of all living organisms. Located within the membrane, it facilitates the conversion of ADP into ATP using an inorganic phosphate, leveraging the proton concentration gradient across the membrane [1]. The proton flow induces rotation in the membrane domain of ATP synthase (specifically, the rotor c-ring). This rotation triggers conformational shifts in the $F_1$ segment of ATP synthase, catalyzing ATP synthesis.

A critical bioenergetic metric is the ATP/$H^+$ ratio, which represents the number of ATP molecules synthesized for every proton passing through the c-ring. This ratio is influenced by the stoichiometry of the c-ring, specifically the number of $c_1$ monomers constituting the $c_n$-ring, and is generally represented as 3/n. While evidence suggests that the stoichiometry of cn is influenced by the amino acid sequence of $c_1$ [2], several questions remain about the primary determinants of c-ring stoichiometry. The impact of the surrounding protein environment on stoichiometry, for instance, remains elusive. Additionally, for many organisms, the stoichiometry of c-ring is yet to be determined, and current algorithms, such as Alphafold, have been inadequate in predicting it.

In this study, we examined a recombinant c-ring derived from spinach chloroplasts, produced in Escherichia coli cells. The gene was cloned into E.coli TG-1 cells, followed by the isolation and purification of $c_1$ monomers. Utilizing gel electrophoresis and Western blotting, we analyzed the proteins. Our findings confirm the successful expression of the $c_1$ protein from spinach chloroplasts in E.coli cells. We further discuss methodologies for assembling the c ring within E.coli cells.

We acknowledge the support from the Russian Science Foundation (RSF) Project 22-74-00044.

[1] Vlasov, A. V., et al. "Unusual features of the c-ring of $F_1F_o$ ATP synthases." Scientific reports 9.1 (2019): 1-11.
[2] Pogoryelov, Denys, et al. "Engineering rotor ring stoichiometries in the ATP synthase." Proceedings of the National Academy of Sciences 109.25 (2012): E1599-E1608.

Primary authors

Andronika Minaeva (Student) Stepan Osipov (Moscow Institute of Physics and Technology) Alexey Vlasov (MIPT) Alexander Kuklin (JINR)

Presentation materials